Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX468280: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316327' containing sample 'Staphylococcus aureus W85810'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.4M spots, 693.1M bases, 387.1Mb downloads

UUID: e20347c0-bc7e-4d19-a87a-ba9e9b3063e4

Design: Illumina sequencing of Staphylococcus aureus W85810 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227896 • SRP036977 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus W85810

SAMN02403206 • SRS555328 • All experiments • All runs

Organism: Staphylococcus aureus W85810

Library:

Name: Pond-316327

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 464476.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BIOJ

material_type: DNA:DNA Somatic

product_order: PDO-2547

product_part_number: P-WG-0004

project: G54671

research_project: RP-509

root_sample_id: SM-4T117

sample_id: SM-5BIOJ

work_request: 39320

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.4M spots, 693.1M bases, 387.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165945	3,431,113	693.1M	387.1Mb	2014-02-09

ID:: 648468

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